The experimental course of College Computer Foundation is a course of developing students' practical ability of computer, which bears the important task of training students' ability of application and innovation in computer science. This article researches and analyzes the main problems of University Computer Foundation teaching at the present stage, and find out the problems existing in the teaching of this course. Aiming at these problems, this article puts forward specific solutions: combination of theory and experiment, stratified teaching, experiment teaching content innovation, breaking the traditional assessment methods and strengthening the construction of experimental teaching team, hoping that the scheme can effectively improve students' computer application ability and innovation ability.